CDS

Accession Number TCMCG065C16163
gbkey CDS
Protein Id XP_004967643.1
Location join(3240716..3241765,3241850..3241942,3242046..3242111,3242201..3242266,3242366..3242851,3242968..3243081)
Gene LOC101757582
GeneID 101757582
Organism Setaria italica

Protein

Length 624aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004967586.2
Definition transcription factor APG isoform X1 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category K
Description helix loop helix domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K12126        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
ko04712        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090227        [VIEW IN EMBL-EBI]
GO:0090229        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000030        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACGTGGGATGCAGGTCCGACGGCAACGAGTTCGCCGAGCTGCTATGGGAGAACGGGCAGGCAGTGGTGCACGGCCGGAGGAAGCAGACGCAGACTTCGTTCCCGCCCTTCACCTGCGCTGCTGCCAGCAGCAGCCGGGCTCAAGAGAAGCAGCCGGGAAGCGACCCCGTGGCGCTGTTCAAGACGGGAGGTGTCTTCGGCGCCGGTGGATTGGTAACATCGGTTCACGACTTCTCTTCCGGCCTAGACGCCACCCGTGACAACGGTGATCTTGATGATACCGTGCCCTGGATCCACTACCCCATCATCGAGGAAGACAGCGCCGCCGCACCTGCCCTTGCAGAGAGCTACAGTCCAGATTTCTTCTCGGAGCTCCATGCAGCGGCAGCGGCGGCAGCAGCGACCAACCCCAGCTCTCTGCCGCCGCCTATCCAGCACACCACCAACAACAGAAGCACCCCGATTGCCACCACCAGCAGAGAACCAGAACCCTCGAAGGAAAGCCACCGCATGCCAGTTCCAGGTCCAGCCACCAGGCCTGAACCACCACAAGCCGAGTTCGCGGCCACCAAGCAGACTCGGCTGGGAGGCGGCGCAGAGGGCTTGATGAACTTCTCCCTCTTCTCTAGGCCGGCAGCCATGGCGCGAGCAAGCCTGCAGAGCGCACAGAGGCCACCACAAACAGGCACAGACAAGGCGTCCAATGTCACCACGAGTACCCGCGTGGAGTCCACGGTTCTCCAGTCATCCATCGGGCCAAGAACTACTCCTGTTTTCACGGACCAGAGGACGGCGTGGTCACAGCCCAAGGAGGTGCGGTTCTCATGCACGGCAGCGCCAACCGCTGGTAACCTGCAGCAAGAGATGCCCCGGGACAGACTTGGCAGCATGACTCTGCAGAAACAGGTCAAGACCAGGAAGGAGCCTGAGGCCGCAGTCGCTACTTCGTCAGTCTGCTCCGGCAATGGAGCTGGAATAGGAAATGATGAGTCCTGGCGCCAACACAAGAGGAAGAGTCAAGCCGAGTGTTCTGCCAGCCAAGATGATGATCTTGAAGATGAGTCCGGTGGTGCCAGAAGATCTGGCAGCAGAGGCACGAAGCGCAGCCGCACCGCCGAGGTGCACAATTTGTCAGAAAGGAGGAGAAGAGACAGGATCAACGAGAAAATGCGCGCCCTGCAAGAACTCATCCCCAACTGCAACAAGATTGACAAAGCCTCAATGCTAGACGAAGCGATTGAGTACCTCAAAACCCTTCAGCTTCAAGTTCAGATGATGTCCATGGGAAGTGGGCTGTGCATTCCTCCAATGCTGCTGCCACCAACCATGCAGCACTTGCAAATCCCCCAAATAGCTCATTTCCCTCATCTCGGCATGGGATTGGGGTATGGGATGGGTGTCTTCGACATGAACAGCAGCCCAGCGGTTCCCTTTCCGTCCATGCCTGGTGCTCACTTCCCTTGCTCGATGATCCCAGGCACGACAGCACAAGGTCTTGGGATGCCTGGAAGAAACACGGTACCAATGTTTGGACTTCCCGGACAAGCAATACATCCATCAGCATCTAGTGTACAGCCATTCCCATCTTTGGCTGGCCTTCCTGTTAGGCCAAACCTGGCCCCTCAAGTCTCAGCAGCCATGGCTAACATGGTGCAGGAGCAACATCAAGACGTAGCAACTCAACAGCAGCAGAATATGAATAGTGAAGCTCGACAGGGAACAAATACAGGAGATCCAGAATTACAGACCATCCTGCAGGTTGAGAACCAGCATTTTAGTGTACCCTCATCAGCACAAACAGAAAGTGGTCCGTTTCTGGATAGTGGCGGCAACAGGACTGATACTGCAGGGAGAAATGGGGCTGAAAGATAA
Protein:  
MYVGCRSDGNEFAELLWENGQAVVHGRRKQTQTSFPPFTCAAASSSRAQEKQPGSDPVALFKTGGVFGAGGLVTSVHDFSSGLDATRDNGDLDDTVPWIHYPIIEEDSAAAPALAESYSPDFFSELHAAAAAAAATNPSSLPPPIQHTTNNRSTPIATTSREPEPSKESHRMPVPGPATRPEPPQAEFAATKQTRLGGGAEGLMNFSLFSRPAAMARASLQSAQRPPQTGTDKASNVTTSTRVESTVLQSSIGPRTTPVFTDQRTAWSQPKEVRFSCTAAPTAGNLQQEMPRDRLGSMTLQKQVKTRKEPEAAVATSSVCSGNGAGIGNDESWRQHKRKSQAECSASQDDDLEDESGGARRSGSRGTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLLPPTMQHLQIPQIAHFPHLGMGLGYGMGVFDMNSSPAVPFPSMPGAHFPCSMIPGTTAQGLGMPGRNTVPMFGLPGQAIHPSASSVQPFPSLAGLPVRPNLAPQVSAAMANMVQEQHQDVATQQQQNMNSEARQGTNTGDPELQTILQVENQHFSVPSSAQTESGPFLDSGGNRTDTAGRNGAER